IsoformSwitchAnalyzeR 1.2.0-foss-2018b-R-3.5.1

Unsupported: Use of this version of IsoformSwitchAnalyzeR is not supported. More information on our Applications Support and Retention Policy.

IsoformSwitchAnalyzeR enables identification and analysis of alternative splicing and isoform switches with predicted functional consequence from quantification by Cufflinks/Cuffdiff etc.

Accessing IsoformSwitchAnalyzeR 1.2.0-foss-2018b-R-3.5.1

To load the module for IsoformSwitchAnalyzeR 1.2.0-foss-2018b-R-3.5.1 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load bear-apps-unsupported/handbuilt/2019
module load IsoformSwitchAnalyzeR/1.2.0-foss-2018b-R-3.5.1

BEAR Apps Version

2019h

Extensions

  • DEXSeq 1.26.0
  • DRIMSeq 1.8.0
  • IsoformSwitchAnalyzeR 1.2.0

More Information

For more information visit the IsoformSwitchAnalyzeR website.

Dependencies

This version of IsoformSwitchAnalyzeR has a direct dependency on: foss/2018b R/3.5.1-foss-2018b R-bundle-Bioconductor/3.7-foss-2018b-R-3.5.1

Last modified on 17th June 2019