MetaXcan 0.7.3-foss-2019b-Python-3.7.4

Unsupported: Use of this version of MetaXcan is not supported. More information on our Applications Support and Retention Policy.

MetaXcan is a set of tools to integrate genomic information of biological mechanisms with complex traits.

Accessing MetaXcan 0.7.3-foss-2019b-Python-3.7.4

To load the module for MetaXcan 0.7.3-foss-2019b-Python-3.7.4 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load bear-apps-unsupported/handbuilt/2019
module load MetaXcan/0.7.3-foss-2019b-Python-3.7.4

BEAR Apps Version

2019h

Extensions

  • bgen-reader-3.0.7
  • cachetools 4.1.1
  • coloredlogs 14.0
  • cyvcf2 0.20.9
  • h5py-cache-1.0
  • humanfriendly 8.2
  • MetaXcan 0.7.3
  • pytest-runner-5.2
  • scipy 1.2.3
  • texttable 1.6.3

More Information

For more information visit the MetaXcan website.

Dependencies

This version of MetaXcan has a direct dependency on: cURL/7.66.0-GCCcore-8.3.0 dask/2.8.0-foss-2019b-Python-3.7.4 foss/2019b h5py/2.10.0-foss-2019b-Python-3.7.4 limix-bgen/3.0.3-GCCcore-8.3.0 Python/3.7.4-GCCcore-8.3.0 SciPy-bundle/2019.10-foss-2019b-Python-3.7.4 statsmodels/0.11.0-foss-2019b-Python-3.7.4 tqdm/4.41.1-GCCcore-8.3.0 xarray/0.15.1-foss-2019b-Python-3.7.4

Last modified on 30th October 2020