Unsupported: Use of this version of Trimmomatic is not supported. More information on our Applications Support and Retention Policy.Trimmomatic performs a variety of useful trimming tasks for illumina paired-end and single ended data.The selection of trimming steps and their associated parameters are supplied on the command line.
Accessing Trimmomatic 0.39-Java-11
To load the module for Trimmomatic 0.39-Java-11 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load bear-apps-unsupported/handbuilt/2019
module load Trimmomatic/0.39-Java-11
BEAR Apps Version
For more information visit the Trimmomatic website.
This version of Trimmomatic has a direct dependency on: Java/11
This version of Trimmomatic is a direct dependent of: funannotate/1.8.1-foss-2019b-Python-2.7.16 funannotate/1.8.1-foss-2019b-Python-3.7.4 KneadData/0.7.6-foss-2019b-Python-3.7.4-Java-11 shovill/1.1.0-foss-2019b-Python-3.7.4
These versions of Trimmomatic are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.
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Last modified on 10th June 2020