clusterProfiler 3.16.1-foss-2020b-R-4.0.3

Unsupported: Use of this version of clusterProfiler is not supported. More information on our Applications Support and Retention Policy.

There is a newer version of clusterProfiler

statistical analysis and visualization of functional profiles for genes and gene clusters

Accessing clusterProfiler 3.16.1-foss-2020b-R-4.0.3

To load the module for clusterProfiler 3.16.1-foss-2020b-R-4.0.3 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load bear-apps-unsupported/handbuilt/2019
module load clusterProfiler/3.16.1-foss-2020b-R-4.0.3

BEAR Apps Version

2019h

Extensions

  • clusterProfiler 3.16.1
  • DO.db 2.9
  • DOSE 3.16.0
  • enrichplot 1.10.2
  • europepmc 0.4
  • ggplotify 0.0.7
  • GOSemSim 2.16.1
  • gridGraphics-0.5-1
  • rvcheck 0.1.8
  • scatterpie 0.1.6
  • shadowtext 0.0.8

More Information

For more information visit the clusterProfiler website.

Dependencies

This version of clusterProfiler has a direct dependency on: foss/2020b R/4.0.3-foss-2020b R-bundle-Bioconductor/3.12-foss-2020b-R-4.0.3

Other Versions

These versions of clusterProfiler are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version BEAR Apps Version
4.4.4-foss-2021b-R-4.2.0 2021b

Last modified on 13th July 2021