mandrake 1.2.2-foss-2022a

Unsupported: Use of this version of mandrake is not supported. More information on our Applications Support and Retention Policy.

Fast visualisation of the population structure of pathogens using Stochastic Cluster Embedding.

Accessing mandrake 1.2.2-foss-2022a

To load the module for mandrake 1.2.2-foss-2022a please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load bear-apps-unsupported/handbuilt/2019
module load mandrake/1.2.2-foss-2022a

BEAR Apps Version



  • mandrake 1.2.2

More Information

For more information visit the mandrake website.


This version of mandrake has a direct dependency on: Boost/1.79.0-GCC-11.3.0 Eigen/3.4.0-GCCcore-11.3.0 FFmpeg/4.4.2-GCCcore-11.3.0 foss/2022a h5py/3.7.0-foss-2022a HDBSCAN/0.8.29-foss-2022a matplotlib/3.5.2-foss-2022a pp-sketchlib/2.1.1-foss-2022a pybind11/2.9.2-GCCcore-11.3.0 Python/3.10.4-GCCcore-11.3.0 scikit-learn/1.1.2-foss-2022a SciPy-bundle/2022.05-foss-2022a tqdm/4.64.0-GCCcore-11.3.0

Required By

This version of mandrake is a direct dependent of: poppunk/2.6.1-foss-2022a

Last modified on 15th November 2023