BioPerl 1.7.8-GCCcore-11.2.0
Bioperl is the product of a community effort to produce Perl code which is useful in biology. Examples include Sequence objects, Alignment objects and database searching objects.Accessing BioPerl 1.7.8-GCCcore-11.2.0
To load the module for BioPerl 1.7.8-GCCcore-11.2.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load BioPerl/1.7.8-GCCcore-11.2.0
BEAR Apps Version
Extensions
- Bio::Procedural 1.7.4
- BioPerl 1.7.8
- XML::DOM::XPath 0.14
- XML::Writer 0.900
More Information
For more information visit the BioPerl website.
Dependencies
This version of BioPerl has a direct dependency on: DB_File/1.857-GCCcore-11.2.0 GCCcore/11.2.0 Perl/5.34.0-GCCcore-11.2.0 XML-LibXML/2.0207-GCCcore-11.2.0
Required By
This version of BioPerl is a direct dependent of: Bio-SearchIO-hmmer/1.7.3-GCC-11.2.0 prokka/1.14.5-gompi-2021b
Other Versions
These versions of BioPerl are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.
| Version | BEAR Apps Version |
|---|---|
| 1.7.7-GCCcore-9.3.0 | 2020a |
| 1.7.2-GCCcore-8.3.0-Perl-5.30.0 | 2019b |
| 1.7.2-GCCcore-8.3.0 | 2019b |
| 1.7.2-GCCcore-8.2.0-Perl-5.28.1 | 2019a |
| 1.7.2-foss-2018b-Perl-5.28.0 | 2018b |
Last modified on 10th February 2023