BEAR Applications

Bowtie 1.2.2-foss-2018b

There is a newer version of Bowtie

Bowtie is an ultrafast, memory-efficient short read aligner. It aligns short DNA sequences (reads) to the human genome.

Accessing Bowtie 1.2.2-foss-2018b

To load the module for Bowtie 1.2.2-foss-2018b please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load Bowtie/1.2.2-foss-2018b

BEAR Apps Version

2020a

More Information

For more information visit the Bowtie website.

Dependencies

This version of Bowtie has a direct dependency on: foss/2018b tbb/2018_U5-GCCcore-7.3.0 zlib/1.2.11-GCCcore-7.3.0

Required By

This version of Bowtie is a direct dependent of: Trinity/2.8.4-foss-2018b

Other Versions

These versions of Bowtie are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 3rd June 2019