Bowtie 1.3.1-GCC-12.2.0

Bowtie is an ultrafast, memory-efficient short read aligner. It aligns short DNA sequences (reads) to the human genome.

Accessing Bowtie 1.3.1-GCC-12.2.0

To load the module for Bowtie 1.3.1-GCC-12.2.0 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load Bowtie/1.3.1-GCC-12.2.0

BEAR Apps Version

2020a

More Information

For more information visit the Bowtie website.

Dependencies

This version of Bowtie has a direct dependency on: GCC/12.2.0 tbb/2021.10.0-GCCcore-12.2.0 zlib/1.2.12-GCCcore-12.2.0

Required By

This version of Bowtie is a direct dependent of: RSEM/1.3.3-foss-2022b ShortStack/4.0.2-foss-2022b Trinity/2.15.1-foss-2022b

Other Versions

These versions of Bowtie are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version BEAR Apps Version
1.2.3-GCC-8.3.0 2019b
1.2.2-foss-2018b 2018b

Last modified on 25th October 2023