FLASH 1.2.11-GCC-8.3.0

FLASH (Fast Length Adjustment of SHort reads) is a very fast and accurate software tool to merge paired-end reads from next-generation sequencing experiments. FLASH is designed to merge pairs of reads when the original DNA fragments are shorter than twice the length of reads. The resulting longer reads can significantly improve genome assemblies. They can also improve transcriptome assembly when FLASH is used to merge RNA-seq data.

Accessing FLASH 1.2.11-GCC-8.3.0

To load the module for FLASH 1.2.11-GCC-8.3.0 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load FLASH/1.2.11-GCC-8.3.0

BEAR Apps Version

2020a

More Information

For more information visit the FLASH website.

Dependencies

This version of FLASH has a direct dependency on: GCC/8.3.0 zlib/1.2.11-GCCcore-8.3.0

Required By

This version of FLASH is a direct dependent of: shovill/1.1.0-foss-2019b-Python-3.7.4

Last modified on 11th November 2020