There is a newer version of GMAP-GSNAPGMAP: A Genomic Mapping and Alignment Program for mRNA and EST Sequences GSNAP: Genomic Short-read Nucleotide Alignment Program
Accessing GMAP-GSNAP 2019-02-15-foss-2018b
To load the module for GMAP-GSNAP 2019-02-15-foss-2018b please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load GMAP-GSNAP/2019-02-15-foss-2018b
BEAR Apps Version
For more information visit the GMAP-GSNAP website.
This version of GMAP-GSNAP has a direct dependency on: bzip2/1.0.6-GCCcore-7.3.0 foss/2018b zlib/1.2.11-GCCcore-7.3.0
This version of GMAP-GSNAP is a direct dependent of: rnaQUAST/1.5.1-foss-2018b-Python-2.7.15
These versions of GMAP-GSNAP are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.
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Last modified on 4th June 2019