There is a newer version of HOMER
HOMER (Hypergeometric Optimization of Motif EnRichment) is a suite of tools for Motif Discovery and
next-gen sequencing analysis. It is a collection of command line programs for unix-style operating systems written
in Perl and C++. HOMER was primarily written as a de novo motif discovery algorithm and is well suited for finding
8-20 bp motifs in large scale genomics data. HOMER contains many useful tools for analyzing ChIP-Seq, GRO-Seq,
RNA-Seq, DNase-Seq, Hi-C and numerous other types of functional genomics sequencing data sets.
Accessing HOMER 4.11-foss-2019b
To load the module for HOMER 4.11-foss-2019b please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load HOMER/4.11-foss-2019b
BEAR Apps Version
For more information visit the HOMER website.
This version of HOMER has a direct dependency on:
These versions of HOMER are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.
Last modified on 13th October 2020