HiCUP 0.8.3-foss-2021a
Hi-C data processing pipelineAccessing HiCUP 0.8.3-foss-2021a
To load the module for HiCUP 0.8.3-foss-2021a please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):
module load HiCUP/0.8.3-foss-2021a
BEAR Apps Version
More Information
For more information visit the HiCUP website.
Dependencies
This version of HiCUP has a direct dependency on: Bowtie2/2.4.4-GCC-10.3.0 foss/2021a gzip/1.10-GCCcore-10.3.0 Perl/5.32.1-GCCcore-10.3.0 R/4.1.0-foss-2021a SAMtools/1.12-GCC-10.3.0
Last modified on 2nd February 2022