MUSCLE 5.1-GCCcore-11.2.0

MUSCLE is one of the best-performing multiple alignment programs according to published benchmark tests, with accuracy and speed that are consistently better than CLUSTALW. MUSCLE can align hundreds of sequences in seconds. Most users learn everything they need to know about MUSCLE in a few minutes-only a handful of command-line options are needed to perform common alignment tasks.

Accessing MUSCLE 5.1-GCCcore-11.2.0

To load the module for MUSCLE 5.1-GCCcore-11.2.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load MUSCLE/5.1-GCCcore-11.2.0

BEAR Apps Version


More Information

For more information visit the MUSCLE website.


This version of MUSCLE has a direct dependency on: GCCcore/11.2.0

Required By

This version of MUSCLE is a direct dependent of: PhyloPhlAn/3.0.2-foss-2021b

Other Versions

These versions of MUSCLE are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version BEAR Apps Version
3.8.1551-GCC-8.3.0 2019b

Last modified on 14th July 2022