Seurat 3.2.0-foss-2019b-R-3.6.2
There is a newer version of Seurat
Seurat is an R package designed for QC, analysis, and exploration of single cell RNA-seq data.Accessing Seurat 3.2.0-foss-2019b-R-3.6.2
To load the module for Seurat 3.2.0-foss-2019b-R-3.6.2 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load Seurat/3.2.0-foss-2019b-R-3.6.2
BEAR Apps Version
Extensions
- dqrng 0.2.1
- future 1.17.0
- future.apply 1.5.0
- leiden 0.3.3
- patchwork 1.0.0
- RcppAnnoy 0.0.16
- RcppParallel 5.0.1
- RSpectra-0.16-0
- rsvd 1.0.3
- sctransform 0.2.1
- Seurat 3.2.0
- sitmo 2.0.1
- uwot 0.1.8
More Information
For more information visit the Seurat website.
Dependencies
This version of Seurat has a direct dependency on: foss/2019b R/3.6.2-foss-2019b
Required By
This version of Seurat is a direct dependent of: DoubletFinder/20200901-foss-2019b-R-3.6.2 Signac/1.0.0-foss-2019b-R-3.6.2 SoupX/1.4.8-foss-2019b-R-3.6.2
Other Versions
These versions of Seurat are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.
| Version | BEAR Apps Version |
|---|---|
| 4.0.4-foss-2020b-R-4.0.3 | 2020b |
| 4.0.0-foss-2020a-R-4.0.0 | 2020a |
| 3.1.5-foss-2019b-R-3.6.2 | 2019b |
| 3.1.1-foss-2019a-R-3.6.0 | 2019a |
| af2925c-foss-2020b-R-4.0.3 | 2020b |
Last modified on 5th October 2020