BEAR Applications

cgat 0.6.5-foss-2019b-Python-3.7.4

There is a newer version of cgat

cgat : the Computational Genomics Analysis Toolkit

Accessing cgat 0.6.5-foss-2019b-Python-3.7.4

To load the module for cgat 0.6.5-foss-2019b-Python-3.7.4 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load cgat/0.6.5-foss-2019b-Python-3.7.4

BEAR Apps Version

2020a

More Information

For more information visit the cgat website.

Dependencies

This version of cgat has a direct dependency on: foss/2019b HTSlib/1.10.2-GCCcore-8.3.0 Pysam/0.15.3-GCC-8.3.0 Python/3.7.4-GCCcore-8.3.0 SciPy-bundle/2019.10-foss-2019b-Python-3.7.4

Other Versions

These versions of cgat are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 4th February 2022