clust 1.12.0-foss-2020a-Python-3.8.2

A fully automated method for identification of clusters of genes that are consistently co-expressed (well-correlated) in one or more heterogeneous datasets from one or multiple species.

Accessing clust 1.12.0-foss-2020a-Python-3.8.2

To load the module for clust 1.12.0-foss-2020a-Python-3.8.2 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load clust/1.12.0-foss-2020a-Python-3.8.2

BEAR Apps Version

2020a

Architectures

EL8-cascadelakeEL8-haswell

The listed architectures consist of two part: OS-CPU.

  • BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
  • BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.

Extensions

  • clust 1.12.0
  • portalocker 2.3.0

More Information

For more information visit the clust website.

Dependencies

This version of clust has a direct dependency on: foss/2020a matplotlib/3.2.1-foss-2020a-Python-3.8.2 Python/3.8.2-GCCcore-9.3.0 scikit-learn/0.23.2-foss-2020a-Python-3.8.2 SciPy-bundle/2020.03-foss-2020a-Python-3.8.2

Last modified on 23rd June 2021