BEAR Applications

gprofiler-official 1.0.0-foss-2021b

The official Python 3 interface to the g:Profiler toolkit for enrichment analysis of functional (GO and other) terms, conversion between identifier namespaces and mapping orhologous genes in related organisms.

Accessing gprofiler-official 1.0.0-foss-2021b

To load the module for gprofiler-official 1.0.0-foss-2021b please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load gprofiler-official/1.0.0-foss-2021b

BEAR Apps Version

2020a

Extensions

• gprofiler-official-1.0.0

More Information

For more information visit the gprofiler-official website.

Dependencies

This version of gprofiler-official has a direct dependency on: foss/2021b Python/3.9.6-GCCcore-11.2.0 SciPy-bundle/2021.10-foss-2021b

Required By

This version of gprofiler-official is a direct dependent of: BEAR-Python-MSc-Bioinformatics/2021b-foss-2021b

Other Versions

These versions of gprofiler-official are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 10th August 2022