There is a newer version of h5pyHDF5 for Python (h5py) is a general-purpose Python interface to the Hierarchical Data Format library, version 5. HDF5 is a versatile, mature scientific software library designed for the fast, flexible storage of enormous amounts of data.
Accessing h5py 3.2.1-foss-2021a
To load the module for h5py 3.2.1-foss-2021a please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load h5py/3.2.1-foss-2021a
BEAR Apps Version
For more information visit the h5py website.
This version of h5py has a direct dependency on: foss/2021a HDF5/1.10.7-gompi-2021a Python/3.9.5-GCCcore-10.3.0 SciPy-bundle/2021.05-foss-2021a
This version of h5py is a direct dependent of: CellBender/0.2.0-foss-2021a-CUDA-11.3.1 CellBender/0.2.0-foss-2021a FSL/188.8.131.52-foss-2021a FSLeyes/1.3.3-foss-2021a loompy/3.0.7-foss-2021a Megalodon/2.4.2-foss-2021a PyTorch-Geometric/2.0.4-foss-2021a-CUDA-11.3.1 scanpy/1.8.1-foss-2021a scVelo/0.2.4-foss-2021a TensorFlow/2.6.0-foss-2021a TensorFlow/2.6.0-foss-2021a-CUDA-11.3.1 velocyto/0.17.17-foss-2021a
These versions of h5py are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.
Last modified on 26th November 2021