BEAR Applications

qqman 0.1.8-foss-2020a-R-4.0.0

Create Q-Q and manhattan plots for GWAS data from PLINK results.

Accessing qqman 0.1.8-foss-2020a-R-4.0.0

To load the module for qqman 0.1.8-foss-2020a-R-4.0.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load qqman/0.1.8-foss-2020a-R-4.0.0

BEAR Apps Version

2020a

Architectures

EL8-cascadelake — EL8-haswell — Ubuntu20.04-haswell

The listed architectures consist of two part: OS-CPU.

• BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
• BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.

Extensions

• qqman 0.1.8

More Information

For more information visit the qqman website.

Dependencies

This version of qqman has a direct dependency on: foss/2020a R/4.0.0-foss-2020a

Required By

This version of qqman is a direct dependent of: BEAR-R-bio/2020a-foss-2020a-R-4.0.0

Other Versions

These versions of qqman are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 4th October 2021