BEAR Applications

snakemake 5.2.4-foss-2018b-Python-3.6.6

There is a newer version of snakemake

The Snakemake workflow management system is a tool to create reproducible and scalable data analyses.

Accessing snakemake 5.2.4-foss-2018b-Python-3.6.6

To load the module for snakemake 5.2.4-foss-2018b-Python-3.6.6 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load snakemake/5.2.4-foss-2018b-Python-3.6.6

BEAR Apps Version

2020a

Extensions

• appdirs 1.4.3
• ConfigArgParse 0.13.0
• datrie 0.7.1
• docutils 0.14
• jsonschema 2.6.0
• ratelimiter 1.2.0.post0
• snakemake 5.2.4
• wrapt 1.10.11

More Information

For more information visit the snakemake website.

Dependencies

This version of snakemake has a direct dependency on: foss/2018b GitPython/2.1.11-foss-2018b-Python-3.6.6 Python/3.6.6-foss-2018b PyYAML/3.13-foss-2018b-Python-3.6.6

Required By

This version of snakemake is a direct dependent of: amplimap/0.4.16-foss-2018b-Python-3.6.6

Other Versions

These versions of snakemake are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 19th February 2021