BEAR Applications

snpEff 4.5covid19-Java-1.8

There is a newer version of snpEff

snpEff is a genetic variant annotation and effect prediction toolbox. It annotates and predicts the effects of variants on genes (such as amino acid changes).

Accessing snpEff 4.5covid19-Java-1.8

To load the module for snpEff 4.5covid19-Java-1.8 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load snpEff/4.5covid19-Java-1.8

BEAR Apps Version

2020a

More Information

For more information visit the snpEff website.

Dependencies

This version of snpEff has a direct dependency on: Java/1.8

Other Versions

These versions of snpEff are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 17th June 2020