BCFtools 1.9-foss-2018b
There is a newer version of BCFtools
Samtools is a suite of programs for interacting with high-throughput sequencing data. BCFtools - Reading/writing BCF2/VCF/gVCF files and calling/filtering/summarising SNP and short indel sequence variantsAccessing BCFtools 1.9-foss-2018b
To load the module for BCFtools 1.9-foss-2018b please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):
module load BCFtools/1.9-foss-2018b
BEAR Apps Version
More Information
For more information visit the BCFtools website.
Dependencies
This version of BCFtools has a direct dependency on: bzip2/1.0.6-GCCcore-7.3.0 foss/2018b GSL/2.5-GCC-7.3.0-2.30 HTSlib/1.9-foss-2018b XZ/5.2.4-GCCcore-7.3.0 zlib/1.2.11-GCCcore-7.3.0
Required By
This version of BCFtools is a direct dependent of: AUGUSTUS/3.3.2-foss-2018b-Python-2.7.15
Other Versions
These versions of BCFtools are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.
| Version | BEAR Apps Version |
|---|---|
| 1.17-GCC-12.2.0 | 2022b |
| 1.15.1-GCC-11.3.0 | 2022a |
| 1.10.2-GCC-9.3.0 | 2020a |
| 1.10.2-GCC-8.3.0 | 2019b |
| 1.9-foss-2019a | 2019a |
Last modified on 3rd June 2019