Bismark 0.24.2-foss-2021b

A tool to map bisulfite converted sequence reads and determine cytosine methylation states

Accessing Bismark 0.24.2-foss-2021b

To load the module for Bismark 0.24.2-foss-2021b please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load Bismark/0.24.2-foss-2021b

BEAR Apps Version

2020b

More Information

For more information visit the Bismark website.

Dependencies

This version of Bismark has a direct dependency on: Bowtie2/2.4.4-GCC-11.2.0 foss/2021b Perl/5.34.0-GCCcore-11.2.0 SAMtools/1.15.1-GCC-11.2.0

Other Versions

These versions of Bismark are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version BEAR Apps Version
0.22.3-foss-2019b 2019b

Last modified on 21st November 2023