BEAR Applications

Bowtie 1.2.3-GCC-8.3.0

Bowtie is an ultrafast, memory-efficient short read aligner. It aligns short DNA sequences (reads) to the human genome.

Accessing Bowtie 1.2.3-GCC-8.3.0

To load the module for Bowtie 1.2.3-GCC-8.3.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load Bowtie/1.2.3-GCC-8.3.0

BEAR Apps Version

2020b

More Information

For more information visit the Bowtie website.

Dependencies

This version of Bowtie has a direct dependency on: GCC/8.3.0 tbb/2019_U9-GCCcore-8.3.0 zlib/1.2.11-GCCcore-8.3.0

Required By

This version of Bowtie is a direct dependent of: FastQ_Screen/0.14.1-foss-2019b-Perl-5.30.0

Other Versions

These versions of Bowtie are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 10th July 2020