HTSlib 1.9-foss-2018b

There is a newer version of HTSlib

A C library for reading/writing high-throughput sequencing data. This package includes the utilities bgzip and tabix

Accessing HTSlib 1.9-foss-2018b

To load the module for HTSlib 1.9-foss-2018b please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load HTSlib/1.9-foss-2018b

BEAR Apps Version

2020b

More Information

For more information visit the HTSlib website.

Dependencies

This version of HTSlib has a direct dependency on: bzip2/1.0.6-GCCcore-7.3.0 cURL/7.60.0-GCCcore-7.3.0 foss/2018b XZ/5.2.4-GCCcore-7.3.0 zlib/1.2.11-GCCcore-7.3.0

Required By

This version of HTSlib is a direct dependent of: AUGUSTUS/3.3.2-foss-2018b-Python-2.7.15 BCFtools/1.9-foss-2018b DeNovoGear/387354d-foss-2018b Triodenovo/0.06-foss-2018b VCFtools/0.1.16-foss-2018b-Perl-5.28.0

Other Versions

These versions of HTSlib are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 3rd June 2019