IsoformSwitchAnalyzeR 1.2.0-foss-2018b-R-3.5.1

IsoformSwitchAnalyzeR enables identification and analysis of alternative splicing and isoform switches with predicted functional consequence from quantification by Cufflinks/Cuffdiff etc.

Accessing IsoformSwitchAnalyzeR 1.2.0-foss-2018b-R-3.5.1

To load the module for IsoformSwitchAnalyzeR 1.2.0-foss-2018b-R-3.5.1 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load IsoformSwitchAnalyzeR/1.2.0-foss-2018b-R-3.5.1

BEAR Apps Version

2020b

Extensions

  • DEXSeq 1.26.0
  • DRIMSeq 1.8.0
  • IsoformSwitchAnalyzeR 1.2.0

More Information

For more information visit the IsoformSwitchAnalyzeR website.

Dependencies

This version of IsoformSwitchAnalyzeR has a direct dependency on: foss/2018b R/3.5.1-foss-2018b R-bundle-Bioconductor/3.7-foss-2018b-R-3.5.1

Last modified on 17th June 2019