BEAR Applications

LiBiNorm 56aa414-foss-2018b

There is a newer version of LiBiNorm

LiBiNorm has been designed to perform gene expression analysis using RNA-seq data. It is command line and output compatible with htseq-count and also includes RNA-seq bias compensation tailored to Smart-seq2 library preparation as described in the paper: Modeling enzyme processivity reveals that RNA-Seq libraries are biased in characteristic and correctable ways

Accessing LiBiNorm 56aa414-foss-2018b

To load the module for LiBiNorm 56aa414-foss-2018b please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load LiBiNorm/56aa414-foss-2018b

BEAR Apps Version

2020b

More Information

For more information visit the LiBiNorm website.

Dependencies

This version of LiBiNorm has a direct dependency on: foss/2018b

Other Versions

These versions of LiBiNorm are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 5th June 2019