MPI3SNP f03aecf-foss-2019bMPI3SNP is a parallel software tool dedicated to genome-wide association studies, performing a third-order exhaustive search. It is targeted to cluster architectures, and mitigates the cubic time complexity inherent to third-order searches by exploiting the several layers of parallelism present in a supercomputer.
Accessing MPI3SNP f03aecf-foss-2019b
To load the module for MPI3SNP f03aecf-foss-2019b please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load MPI3SNP/f03aecf-foss-2019b
There is a GPU enabled version of this module: MPI3SNP f03aecf-fosscuda-2019b
BEAR Apps Version
For more information visit the MPI3SNP website.
This version of MPI3SNP has a direct dependency on: foss/2019b
These versions of MPI3SNP are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.
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Last modified on 5th October 2020