There is a newer version of SEPPSATe-enabled Phylogenetic Placement - addresses the problem of phylogenetic placement of short reads into reference alignments and trees.
Accessing SEPP 4.3.10-foss-2019b-Python-3.7.4
To load the module for SEPP 4.3.10-foss-2019b-Python-3.7.4 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load SEPP/4.3.10-foss-2019b-Python-3.7.4
BEAR Apps Version
For more information visit the SEPP website.
This version of SEPP has a direct dependency on: DendroPy/4.4.0-GCCcore-8.3.0 foss/2019b Python/3.7.4-GCCcore-8.3.0
This version of SEPP is a direct dependent of: BUSCO/4.0.5-foss-2019b-Python-3.7.4
These versions of SEPP are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.
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Last modified on 24th August 2022