TDA 1.6.5-foss-2018b-R-3.5.1

Tools for the statistical analysis of persistent homology and for density clustering. For that, this package provides an R interface for the efficient algorithms of the C++ libraries 'GUDHI' , 'Dionysus' , and 'PHAT' . This package also implements the methods in Fasy et al. (2014) and Chazal et al. (2014) for analyzing the statistical significance of persistent homology features.

Accessing TDA 1.6.5-foss-2018b-R-3.5.1

To load the module for TDA 1.6.5-foss-2018b-R-3.5.1 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load TDA/1.6.5-foss-2018b-R-3.5.1

BEAR Apps Version

2020b

Extensions

  • BH-1.69.0-1
  • TDA 1.6.5

More Information

For more information visit the TDA website.

Dependencies

This version of TDA has a direct dependency on: foss/2018b MPFR/4.0.1-GCCcore-7.3.0 R/3.5.1-foss-2018b

Last modified on 5th June 2019