TRAPeS e65bb7b-foss-2018b-Python-2.7.15
TRAPeS (TCR Reconstruction Algorithm for Paired-End Single-cell), a software for reconstruction of T cell receptors (TCR) using short, paired-end single-cell RNA-sequencing.Accessing TRAPeS e65bb7b-foss-2018b-Python-2.7.15
To load the module for TRAPeS e65bb7b-foss-2018b-Python-2.7.15 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):
module load TRAPeS/e65bb7b-foss-2018b-Python-2.7.15
BEAR Apps Version
More Information
For more information visit the TRAPeS website.
Dependencies
This version of TRAPeS has a direct dependency on: Biopython/1.72-foss-2018b-Python-2.7.15 Bowtie2/2.3.4.2-foss-2018b foss/2018b Pysam/0.15.1-foss-2018b-Python-2.7.15 Python/2.7.15-foss-2018b RSEM/1.3.1-foss-2018b SAMtools/1.9-foss-2018b
Last modified on 5th June 2019