TRAPeS e65bb7b-foss-2018b-Python-2.7.15

TRAPeS (TCR Reconstruction Algorithm for Paired-End Single-cell), a software for reconstruction of T cell receptors (TCR) using short, paired-end single-cell RNA-sequencing.

Accessing TRAPeS e65bb7b-foss-2018b-Python-2.7.15

To load the module for TRAPeS e65bb7b-foss-2018b-Python-2.7.15 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load TRAPeS/e65bb7b-foss-2018b-Python-2.7.15

BEAR Apps Version

2020b

More Information

For more information visit the TRAPeS website.

Dependencies

This version of TRAPeS has a direct dependency on: Biopython/1.72-foss-2018b-Python-2.7.15 Bowtie2/2.3.4.2-foss-2018b foss/2018b Pysam/0.15.1-foss-2018b-Python-2.7.15 Python/2.7.15-foss-2018b RSEM/1.3.1-foss-2018b SAMtools/1.9-foss-2018b

Last modified on 5th June 2019