BEAR Applications

TopHat 2.1.2-foss-2018b

TopHat is a fast splice junction mapper for RNA-Seq reads.

Accessing TopHat 2.1.2-foss-2018b

To load the module for TopHat 2.1.2-foss-2018b please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load TopHat/2.1.2-foss-2018b

BEAR Apps Version

2020b

More Information

For more information visit the TopHat website.

Dependencies

This version of TopHat has a direct dependency on: Boost/1.67.0-foss-2018b foss/2018b zlib/1.2.11-GCCcore-7.3.0

Last modified on 5th June 2019