phateR 1.0.7-foss-2021b-R-4.2.0PHATE (Potential of Heat-diffusion for Affinity-based Trajectory Embedding) is a tool for visualizing high dimensional single-cell data with natural progressions or trajectories. PHATE uses a novel conceptual framework for learning and visualizing the manifold inherent to biological systems in which smooth transitions mark the progressions of cells from one state to another.
Accessing phateR 1.0.7-foss-2021b-R-4.2.0
To load the module for phateR 1.0.7-foss-2021b-R-4.2.0 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):
module load phateR/1.0.7-foss-2021b-R-4.2.0
BEAR Apps Version
- phateR 1.0.7
For more information visit the phateR website.
Last modified on 5th June 2023