scCATCH 2.1-foss-2020a-R-4.0.0single cell Cluster-based Annotation Toolkit for Cellular Heterogeneity (scCATCH) from cluster marker genes identification to cluster annotation based on evidence-based score by matching the identified potential marker genes with known cell markers in tissue-specific cell taxonomy reference database (CellMatch).
Accessing scCATCH 2.1-foss-2020a-R-4.0.0
To load the module for scCATCH 2.1-foss-2020a-R-4.0.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load scCATCH/2.1-foss-2020a-R-4.0.0
BEAR Apps Version
- scCATCH 2.1
For more information visit the scCATCH website.
This version of scCATCH has a direct dependency on: foss/2020a R/4.0.0-foss-2020a Seurat/4.0.0-foss-2020a-R-4.0.0
Last modified on 21st April 2021