BEAR Applications

sleuth 0.30.0-foss-2018b-R-3.5.1

Investigate RNA-Seq transcript abundance from kallisto and perform differential expression analysis.

Accessing sleuth 0.30.0-foss-2018b-R-3.5.1

To load the module for sleuth 0.30.0-foss-2018b-R-3.5.1 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load sleuth/0.30.0-foss-2018b-R-3.5.1

BEAR Apps Version

2020b

More Information

For more information visit the sleuth website.

Dependencies

This version of sleuth has a direct dependency on: foss/2018b R/3.5.1-foss-2018b R-bundle-Bioconductor/3.7-foss-2018b-R-3.5.1

Last modified on 6th June 2019