Biopython 1.73-foss-2019a

There is a newer version of Biopython

Biopython is a set of freely available tools for biological computation written in Python by an international team of developers. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics.

Accessing Biopython 1.73-foss-2019a

To load the module for Biopython 1.73-foss-2019a please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load Biopython/1.73-foss-2019a

There is a GPU enabled version of this module: Biopython 1.73-fosscuda-2019a

BEAR Apps Version

2020h

More Information

For more information visit the Biopython website.

Dependencies

This version of Biopython has a direct dependency on: foss/2019a Python/2.7.15-GCCcore-8.2.0 Python/3.7.2-GCCcore-8.2.0 SciPy-bundle/2019.03-foss-2019a

This version of Biopython is compatible with multiple vesions of Python. At any time, only one of the versions of Python can be active and the desired version of Python should be loaded before loading this version of Biopython.

Required By

This version of Biopython is a direct dependent of: SpliceAI/1.3-foss-2019a-Python-3.7.2 WhatsHap/0.18-foss-2019a-Python-3.7.2

Other Versions

These versions of Biopython are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 22nd July 2019