There is a newer version of BiopythonBiopython is a set of freely available tools for biological computation written in Python by an international team of developers. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics.
Accessing Biopython 1.79-foss-2021b
To load the module for Biopython 1.79-foss-2021b please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load Biopython/1.79-foss-2021b
BEAR Apps Version
For more information visit the Biopython website.
This version of Biopython has a direct dependency on: foss/2021b Python/3.9.6-GCCcore-11.2.0 SciPy-bundle/2021.10-foss-2021b
This version of Biopython is a direct dependent of: bcbio-gff/0.6.9-foss-2021b Bisbee/20210108-foss-2021b-R-4.2.0 CIRI-long/1.1.0-foss-2021b CMSeq/1.0.4-foss-2021b ecc_finder/1.0.0_20221007_67d06f3-foss-2021b MetaPhlAn/3.0.14-foss-2021b NanoFilt/2.8.0-foss-2021b nanopolish/0.14.0-foss-2021b panaroo/1.3.2-foss-2021b PhyloPhlAn/3.0.2-foss-2021b TOBIAS/0.13.3-foss-2021b
These versions of Biopython are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.
Last modified on 14th July 2022