FastQ_Screen 0.14.1-foss-2019b-Perl-5.30.0

FastQ Screen allows you to screen a library of sequences in FastQ format against a set of sequence databases so you can see if the composition of the library matches with what you expect.

Accessing FastQ_Screen 0.14.1-foss-2019b-Perl-5.30.0

To load the module for FastQ_Screen 0.14.1-foss-2019b-Perl-5.30.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load FastQ_Screen/0.14.1-foss-2019b-Perl-5.30.0

BEAR Apps Version

2020h

More Information

For more information visit the FastQ_Screen website.

Dependencies

This version of FastQ_Screen has a direct dependency on: Bismark/0.22.3-foss-2019b Bowtie/1.2.3-GCC-8.3.0 Bowtie2/2.3.5.1-GCC-8.3.0 BWA/0.7.17-GCC-8.3.0 foss/2019b GDGraph/1.54-foss-2019b-Perl-5.30.0 gzip/1.10-GCCcore-8.3.0 Perl/5.30.0-GCCcore-8.3.0 SAMtools/1.10-GCC-8.3.0

Last modified on 10th July 2020