KneadData 0.7.6-foss-2019b-Python-3.7.4-Java-11

KneadData is a tool designed to perform quality control on metagenomic and metatranscriptomic sequencing data, especially data from microbiome experiments.

Accessing KneadData 0.7.6-foss-2019b-Python-3.7.4-Java-11

To load the module for KneadData 0.7.6-foss-2019b-Python-3.7.4-Java-11 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load KneadData/0.7.6-foss-2019b-Python-3.7.4-Java-11

BEAR Apps Version

2020h

Extensions

  • kneaddata 0.7.6

More Information

For more information visit the KneadData website.

Dependencies

This version of KneadData has a direct dependency on: Bowtie2/2.3.5.1-GCC-8.3.0 FastQC/0.11.9-Java-11 foss/2019b Java/11 Python/3.7.4-GCCcore-8.3.0 SAMtools/1.10-GCC-8.3.0 Trimmomatic/0.39-Java-11

Last modified on 10th June 2020