LongQC 1.0-foss-2019b-Python-3.7.4

LongQC is a tool for the data quality control of the PacBio and ONT long reads.

Accessing LongQC 1.0-foss-2019b-Python-3.7.4

To load the module for LongQC 1.0-foss-2019b-Python-3.7.4 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load LongQC/1.0-foss-2019b-Python-3.7.4

BEAR Apps Version

2020h

More Information

For more information visit the LongQC website.

Dependencies

This version of LongQC has a direct dependency on: edlib/1.3.8.post1-foss-2019b-Python-3.7.4 foss/2019b h5py/2.10.0-foss-2019b-Python-3.7.4 matplotlib/3.1.1-foss-2019b-Python-3.7.4 Pysam/0.15.3-GCC-8.3.0 Python/3.7.4-GCCcore-8.3.0 scikit-learn/0.21.3-foss-2019b-Python-3.7.4 SciPy-bundle/2019.10-foss-2019b-Python-3.7.4

Last modified on 28th April 2020