MAGeCK 0.5.9.4-foss-2021a

Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent genome-scale CRISPR-Cas9 knockout screens (or GeCKO) technology. MAGeCK is developed by Wei Li and Han Xu from Dr. Xiaole Shirley Liu's lab at Dana-Farber Cancer Institute, and is being actively updated by Wei Li lab from Children's National Medical Center.

Accessing MAGeCK 0.5.9.4-foss-2021a

To load the module for MAGeCK 0.5.9.4-foss-2021a please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load MAGeCK/0.5.9.4-foss-2021a

BEAR Apps Version

2020h

More Information

For more information visit the MAGeCK website.

Dependencies

This version of MAGeCK has a direct dependency on: foss/2021a Python/3.9.5-GCCcore-10.3.0 SciPy-bundle/2021.05-foss-2021a

Last modified on 7th March 2022