BEAR Applications

MPI3SNP f03aecf-fosscuda-2019b

MPI3SNP is a parallel software tool dedicated to genome-wide association studies, performing a third-order exhaustive search. It is targeted to cluster architectures, and mitigates the cubic time complexity inherent to third-order searches by exploiting the several layers of parallelism present in a supercomputer.

Accessing MPI3SNP f03aecf-fosscuda-2019b

To load the module for MPI3SNP f03aecf-fosscuda-2019b please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load MPI3SNP/f03aecf-fosscuda-2019b

There is a CPU version of this module: MPI3SNP f03aecf-foss-2019b

BEAR Apps Version

2020h

More Information

For more information visit the MPI3SNP website.

Dependencies

This version of MPI3SNP has a direct dependency on: fosscuda/2019b

Other Versions

These versions of MPI3SNP are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 5th October 2020