deepTools 3.5.0-foss-2020a-Python-3.8.2

deepTools is a suite of python tools particularly developed for the efficient analysis of high-throughput sequencing data, such as ChIP-seq, RNA-seq or MNase-seq.

Accessing deepTools 3.5.0-foss-2020a-Python-3.8.2

To load the module for deepTools 3.5.0-foss-2020a-Python-3.8.2 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load deepTools/3.5.0-foss-2020a-Python-3.8.2

BEAR Apps Version

2020h

Extensions

  • deepTools 3.5.0
  • deeptoolsintervals 0.1.9
  • numpydoc 1.1.0
  • py2bit 0.3.0
  • pyBigWig 0.3.17

More Information

For more information visit the deepTools website.

Dependencies

This version of deepTools has a direct dependency on: foss/2020a matplotlib/3.2.1-foss-2020a-Python-3.8.2 plotly.py/4.8.1-GCCcore-9.3.0 Pysam/0.16.0.1-GCC-9.3.0 Python/3.8.2-GCCcore-9.3.0

Required By

This version of deepTools is a direct dependent of: RGT/0.13.2-foss-2020a-Python-3.8.2

Last modified on 3rd December 2020