demultiplex 1.2.2-foss-2021a

Versatile NGS demultiplexer with the following features: Support for FASTA and FASTQ files.Support for gzip and bzip2 compressed files. Support for multiple reads per fragment, e.g., paired-end.

Accessing demultiplex 1.2.2-foss-2021a

To load the module for demultiplex 1.2.2-foss-2021a please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load demultiplex/1.2.2-foss-2021a

BEAR Apps Version

2020h

Extensions

  • demultiplex 1.2.2
  • dict-trie-1.0.1
  • fastools 1.1.4
  • jit_open 1.0.2
  • python-Levenshtein-0.12.2
  • tssv 1.1.2
  • xopen 1.2.1

More Information

For more information visit the demultiplex website.

Dependencies

This version of demultiplex has a direct dependency on: Biopython/1.79-foss-2021a foss/2021a Python/3.9.5-GCCcore-10.3.0 python-isal/0.11.0-GCCcore-10.3.0

Last modified on 7th December 2021