velocyto 0.17.17-foss-2019a-Python-3.7.2

There is a newer version of velocyto

Velocyto is a library for the analysis of RNA velocity.

Accessing velocyto 0.17.17-foss-2019a-Python-3.7.2

To load the module for velocyto 0.17.17-foss-2019a-Python-3.7.2 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load velocyto/0.17.17-foss-2019a-Python-3.7.2

BEAR Apps Version

2020h

Extensions

  • loompy 3.0.6
  • numpy-groupies-0.9.8.4
  • velocyto 0.17.17

More Information

For more information visit the velocyto website.

Dependencies

This version of velocyto has a direct dependency on: foss/2019a h5py/2.10.0-foss-2019a matplotlib/3.0.3-foss-2019a-Python-3.7.2 numba/0.43.1-foss-2019a Pysam/0.15.2-foss-2019a Python/3.7.2-GCCcore-8.2.0 scikit-learn/0.20.3-foss-2019a

Other Versions

These versions of velocyto are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version BEAR Apps Version
0.17.17-foss-2021a 2021a

Last modified on 12th December 2019