BEAR-R-bio 2019b-foss-2019b-R-3.6.2

There is a newer version of BEAR-R-bio

This module provides access to several R bio libraries. It is primarily available for use with RStudio in the BlueBEAR Portal.

Accessing BEAR-R-bio 2019b-foss-2019b-R-3.6.2

To load the module for BEAR-R-bio 2019b-foss-2019b-R-3.6.2 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load BEAR-R-bio/2019b-foss-2019b-R-3.6.2

There is a GPU enabled version of this module: BEAR-R-bio 2019b-fosscuda-2019b-R-3.6.2

BEAR Apps Version

2021a

Dependencies

This version of BEAR-R-bio has a direct dependency on: AUCell/1.8.0-foss-2019b-R-3.6.2 cellassign/520de59-foss-2019b-Python-3.7.4-R-3.6.2 dropEst/0.8.6-foss-2019b-R-3.6.2 FD/1.0-12-foss-2019b-R-3.6.2 foss/2019b Kendall/2.2-foss-2019b-R-3.6.2 Monocle3/0.2.1-foss-2019b-R-3.6.2 phenoptrReports/0.2.6-foss-2019b-R-3.6.2 R/3.6.2-foss-2019b R-bundle-Bioconductor/3.10-foss-2019b-R-3.6.2 R-keras/2.2.5.0-foss-2019b-Python-3.7.4-R-3.6.2 rts/1.0-49-foss-2019b-R-3.6.2 Signac/1.0.0-foss-2019b-R-3.6.2 SingleR/1.0.6-foss-2019b-R-3.6.2 spant/1.4.0-foss-2019b-R-3.6.2 Taxonstand/2.2-foss-2019b-R-3.6.2 trend/1.1.4-foss-2019b-R-3.6.2 ukbtools/0.11.3-foss-2019b-R-3.6.2

Other Versions

These versions of BEAR-R-bio are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 6th May 2020