BLAT 3.5-GCCcore-8.3.0

There is a newer version of BLAT

BLAT on DNA is designed to quickly find sequences of 95% and greater similarity of length 25 bases or more.

Accessing BLAT 3.5-GCCcore-8.3.0

To load the module for BLAT 3.5-GCCcore-8.3.0 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load BLAT/3.5-GCCcore-8.3.0

BEAR Apps Version

2021a

More Information

For more information visit the BLAT website.

Dependencies

This version of BLAT has a direct dependency on: GCCcore/8.3.0 libpng/1.6.37-GCCcore-8.3.0

Required By

This version of BLAT is a direct dependent of: funannotate/1.8.1-foss-2019b-Python-2.7.16 funannotate/1.8.1-foss-2019b-Python-3.7.4 miREvo/f2abc2a-GCCcore-8.3.0-Perl-5.30.0

Other Versions

These versions of BLAT are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version BEAR Apps Version
3.7-GCC-12.2.0 2022b

Last modified on 4th May 2020