DECODE 0.10.0-fosscuda-2020b
DECODE is a Python and Pytorch based deep learning tool for single molecule localization microscopy (SMLM).Accessing DECODE 0.10.0-fosscuda-2020b
To load the module for DECODE 0.10.0-fosscuda-2020b please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load DECODE/0.10.0-fosscuda-2020b
BEAR Apps Version
Extensions
- DECODE 0.10.0
- Deprecated 1.2.13
- importlib_resources 5.4.0
- seaborn 0.10.0
- Spline 0.10.0
More Information
For more information visit the DECODE website.
Dependencies
This version of DECODE has a direct dependency on: fosscuda/2020b GitPython/3.1.14-GCCcore-10.2.0 h5py/3.1.0-fosscuda-2020b matplotlib/3.3.3-fosscuda-2020b pybind11/2.6.0-GCCcore-10.2.0 Python/3.8.6-GCCcore-10.2.0 PyTorch/1.7.1-fosscuda-2020b scikit-image/0.18.1-fosscuda-2020b scikit-learn/0.23.2-fosscuda-2020b SciPy-bundle/2020.11-fosscuda-2020b TensorFlow/2.4.1-fosscuda-2020b tqdm/4.56.2-GCCcore-10.2.0
Other Versions
These versions of DECODE are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.
Version | BEAR Apps Version |
---|---|
20220120-fosscuda-2020b | 2020b |
Last modified on 1st April 2022