BEAR Applications

EnhancedVolcano 1.6.0-foss-2020a-R-4.0.0

There is a newer version of EnhancedVolcano

Volcano plots represent a useful way to visualise the results of differential expression analyses. Here, we present a highly-configurable function that produces publication-ready volcano plots. EnhancedVolcano will attempt to fit as many point labels in the plot window as possible, thus avoiding 'clogging' up the plot with labels that could not otherwise have been read. Other functionality allows the user to identify up to 4 different types of attributes in the same plot space via colour, shape, size, and shade parameter configurations.

Accessing EnhancedVolcano 1.6.0-foss-2020a-R-4.0.0

To load the module for EnhancedVolcano 1.6.0-foss-2020a-R-4.0.0 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load EnhancedVolcano/1.6.0-foss-2020a-R-4.0.0

BEAR Apps Version

2021a

Extensions

• EnhancedVolcano 1.6.0

More Information

For more information visit the EnhancedVolcano website.

Dependencies

This version of EnhancedVolcano has a direct dependency on: foss/2020a R/4.0.0-foss-2020a R-bundle-Bioconductor/3.11-foss-2020a-R-4.0.0

Other Versions

These versions of EnhancedVolcano are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 3rd March 2021