RMBlast 2.9.0-gompi-2019b

RMBlast is a RepeatMasker compatible version of the standard NCBI BLAST suite. The primary difference between this distribution and the NCBI distribution is the addition of a new program 'rmblastn' for use with RepeatMasker and RepeatModeler.

Accessing RMBlast 2.9.0-gompi-2019b

To load the module for RMBlast 2.9.0-gompi-2019b please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load RMBlast/2.9.0-gompi-2019b

BEAR Apps Version

2021a

More Information

For more information visit the RMBlast website.

Dependencies

This version of RMBlast has a direct dependency on: Boost/1.71.0-gompi-2019b bzip2/1.0.8-GCCcore-8.3.0 GMP/6.1.2-GCCcore-8.3.0 gompi/2019b libjpeg-turbo/2.0.3-GCCcore-8.3.0 libpng/1.6.37-GCCcore-8.3.0 LMDB/0.9.24-GCCcore-8.3.0 PCRE/8.43-GCCcore-8.3.0 zlib/1.2.11-GCCcore-8.3.0

Required By

This version of RMBlast is a direct dependent of: funannotate/1.8.1-foss-2019b-Python-2.7.16 funannotate/1.8.1-foss-2019b-Python-3.7.4 Proteinortho/6.0.23-foss-2019b-Python-3.7.4-Perl-5.30.0 Proteinortho/6.0.23-foss-2019b-Python-2.7.16-Perl-5.30.0

Last modified on 12th October 2020